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FAQs 1 Queues What queuing system is running on hydra and where is the documentation? How do I submit a job to the queue? How do I list ...
Queues FAQs What queuing system is running on hydra and where is the documentation? The queuing system running on hydra is the Sun Grid Engine ( SGE ) ...
Compilers: Introduction There are three sets of compilers available on hydra. They all support C , C , f77 and f90 . You can produce and run ...
HPC Primer Hardware Configuration As of Jan 1st, 2013 Compute Nodes Disk Space InfiniBand Fabric Compute Nodes Configuration All the compute ...
How to copy files to/from hydra and what disk(s) to use How to copy files to/from hydra You can copy files to/from hydra using scp or sftp to ...
How to submit a MPI job, using GNU, over IB This primer describes how to submit parallel MPI jobs, using program compiled and linked with the GNU compilers, over ...
Using the GNU compilers (gcc, gfortran) The gnu compilers are in /usr/bin/ , and thus /usr/bin/ must be in your path to access them. Fortan gfortran ...
Using the GNU compilers to run MPI code with IB support MPI with IB support ( mvapich ) is available for the GNU compilers No changes to any of your codes ...
Using the GNU compilers and OpenMP OpenMP is an API to let the compiler parallelize your code, using directives, called pragmas , and a shared memory model, ...
How to use IDL GDL on the cluster Introduction IDL is available on hydra , and uses the pool of the licenses available on the CF managed machines. Since ...
Using the Intel Compilers ( icc , ifort ) The following Intel compilers are available on hydra : Fortran Compiler XE 12.0 Update 2 Debugger ...
How to submit a MPI job, using Intel, over TCP/IP or IB This primer describes how to submit parallel MPI jobs, using program compiled and linked with the Intel ...
Using MPI with the Intel Compilers Read first Using the Intel Compilers ( icc , ifort ) on how to access the Intel compilers the ICS provides support for ...
Using the Intel compilers and OpenMP OpenMP is an API to let the compiler parallelize your code, using directives, called pragmas , and a shared memory model ...
HPC Primer Introduction Introduction Login Support Software Introduction The cluster, hydra , is made of two login nodes, ...
How to Submit Job Arrays Introduction This primer describes how to submit job arrays, namely a slew of serial jobs that run the same script but for a different ...
How to Submit Jobs Introduction Computations on the cluster are started by submitting a job to the queue manager ( SGE ), The queue manager selects a compute ...
Monitoring your job(s) Query Job(s) Status Deleting/Killing a Job Modifying a Job Resources Job Resources Usage Cluster Status Compute ...
How to Submit a MPI Job, using OpenMPI, over TCP/IP This primer describes how to submit parallel MPI jobs, using the OpenMPI implementation (GNU compiler, ORTE ...
How to run OpenMP jobs Introduction OpenMP is a API for multi platform shared memory parallel programming. Programs are parallelized by the compiler, using embedded ...
Using the GNU compilers to run under OpenMPI OpenMPI comes pre built with Rocks using the gnu compilers. Use the compilers in /opt/openmpi/bin/ ...
How to Submit a MPI Job, using OpenMPI, over the IB fabric This primer describes how to submit parallel MPI jobs, using the OpenMPI implementation (GNU compiler ...
Using the PGI compilers The PGI (Group) compilers are available on hydra , (as well as on all CF managed machines.) The latest available version, on ...
How to submit a MPI job, using PGI, over TCP/IP This primer describes how to submit parallel MPI jobs, using program compiled and linked with the PGI compilers ...
Using the PGI compilers and MPI Read first Using the PGI compilers MPI support is provided for the PGI compilers as mpich (using TCP/IP, not IB) Configuration ...
How to submit a MPI job, using PGI, over IB This primer describes how to submit parallel MPI jobs, using program compiled and linked with the PGI compilers, over ...
Using the PGI compilers and MPI for the IB fabric Read first Using the PGI compilers MPI support is provided for the PGI compilers and the IB fabric as ...
Using the PGI compilers and OpenMP OpenMP is an API to let the compiler parallelize your code, using directives, called pragmas , and a shared memory model, ...
Available Queues and Limits A new set of queues and limits have been implemented with the deployment of the InfiniBand fabric (summer 2012). Introduction ...
What`s New Nov 19th 2014: Update on the upgrade. Oct 21 2014: The Intel and PGI compilers have been upgraded. Sep 22nd 2014: ...
Welcome to the 1 @SAO Wiki What`s New Nov 25th 2014: How to Monitor the Cluster and Jobs Status. Disk Space Cleanup: Spring cleaning in December ...
Number of topics: 31

 
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