rtdc9.cfa.harvard.edu swarm2casa.csh
Fri Aug  2 09:44:30 EDT 2019
Start swarm2casa.csh script -

SWARM2CASA pipeline version:  SMA-SWARM2CASA 1.0.6beta (Smithsonian Astrophysical Observatory 2019-07-29)
loaded from PATH=/opt/sma/SWARM2CASA

OUTPUT_FILE_PREFIX= SMA181002
Reading LSB data -
############################################################################
# Welcome to the Smithonian Astrophysical Observatory using swarm2casa -   #
# A Pipeline: Converting SMA SWARM Data to CASA MeasurementSet:            #
# swarm2read .......................... DRX version 1.4.4-beta: 2019-07-22dbg #
############################################################################

Get pathname, input- and output-filenames, sbidx, optidx ......

Handling LSB data -

Warning: Applying both online flagging and applying Tsys ...
wideband patch................swarmDrxP version 1.7.0-beta: 2019-07-22

*********************************
*  Observing Date: 2019 Mar 14  *
*********************************

principal investigator...........Todd Hunter

Geocentrical coordinates (meter):
SMA-ANTID x y z = 1   -128.0506    -73.5050    295.3010
SMA-ANTID x y z = 2    -37.6376   -349.6837     31.6850
SMA-ANTID x y z = 3      0.0000      0.0000      0.0000
SMA-ANTID x y z = 4    -91.0272   -479.0394    145.7238
SMA-ANTID x y z = 5     26.5153   -133.5957   -104.1766
SMA-ANTID x y z = 6   -131.3406   -251.5855    309.4102
SMA-ANTID x y z = 7    -42.6009    -71.5492     86.1979
SMA-ANTID x y z = 8     11.7392    -53.6625    -40.7252
handling header variables........
warning: RX 1 - a number of 10 Tsys measurements may be corrupted.
Read&parse online errors from We-records  of /sma/data/science/mir_data/190314_11:50:03/we_read
number of integrations...........2854
number of c1 + SWARM Spectra.....5
number of polarizations..........1:  XX--non polarization
number of receivers..............2:  rx1->340, rx2->240
number of sidebands..............2:  lsb & usb
number of baselines..............28
number of antennas...............8
number of channels...............65537
computing baseline-based Tsys from eng_read data ...
3c279            id=  1 RA=12:56:11.1651 DEC= -5:47:21.5245
1256-057         id=  2 RA=12:56:11.1651 DEC= -5:47:21.5245
Callisto         id=  3 RA=17:30:06.9077 DEC=-22:37:37.7179
1733-130         id=  4 RA=17:33:02.7026 DEC=-13:04:49.5481
1700-261         id=  5 RA=17:00:53.1532 DEC=-26:10:51.7227
G358.93-0.03     id=  6 RA=17:43:10.0475 DEC=-29:51:46.1302
1744-312         id=  7 RA=17:44:23.5803 DEC=-31:16:35.9862
1924-292         id=  8 RA=19:24:51.0576 DEC=-29:14:30.1241
sgrb2n           id=  9 RA=17:47:19.8766 DEC=-28:22:18.3820
ngc6334l         id= 10 RA=17:20:53.4233 DEC=-35:46:57.8970
A total of 10 source(s) found in this data set.
reading visibilities.............inhid  time(UTC) int(s) percent Gbyt W-status
inhset=..........................00001 0d11:50:41  09.7  000 (%) 0.03  NO
inhset=..........................00100 0d12:05:33  09.7  003 (%) 2.94  OK
inhset=..........................00200 0d12:21:41  09.7  007 (%) 5.87  OK
inhset=..........................00300 0d12:37:49  09.7  010 (%) 8.81  OK
inhset=..........................00400 0d12:54:55  09.7  014 (%) 11.74  OK
inhset=..........................00500 0d13:11:30  09.7  017 (%) 14.68  OK
inhset=..........................00600 0d13:29:34  09.7  021 (%) 17.62  OK
inhset=..........................00700 0d13:47:38  09.7  024 (%) 20.55  OK
inhset=..........................00800 0d14:05:42  09.7  028 (%) 23.49  OK
inhset=..........................00900 0d14:23:07  09.7  031 (%) 26.43  OK
inhset=..........................01000 0d14:41:11  09.7  035 (%) 29.36  OK
inhset=..........................01100 0d14:59:15  09.7  038 (%) 32.30  OK
inhset=..........................01200 0d15:17:00  09.7  042 (%) 35.23  OK
inhset=..........................01300 0d15:35:04  09.7  045 (%) 38.17  OK
inhset=..........................01400 0d15:52:49  09.7  049 (%) 41.11  OK
inhset=..........................01500 0d16:10:53  09.7  052 (%) 44.04  OK
inhset=..........................01600 0d16:27:36  09.7  056 (%) 46.98  OK
inhset=..........................01700 0d16:45:21  09.7  059 (%) 49.91  OK
inhset=..........................01800 0d17:03:25  09.7  063 (%) 52.85  OK
inhset=..........................01900 0d17:21:18  05.2  066 (%) 55.79  NO
inhset=..........................02000 0d17:37:24  09.7  070 (%) 58.72  OK
inhset=..........................02100 0d17:54:49  09.7  073 (%) 61.66  OK
inhset=..........................02200 0d18:12:53  09.7  077 (%) 64.60  OK
inhset=..........................02300 0d18:29:32  09.7  080 (%) 67.53  OK
inhset=..........................02400 0d18:47:36  09.7  084 (%) 70.47  OK
inhset=..........................02500 0d19:05:40  09.7  087 (%) 73.40  OK
inhset=..........................02600 0d19:24:52  09.7  091 (%) 76.34  OK
inhset=..........................02700 0d19:40:43  09.7  094 (%) 79.28  OK
inhset=..........................02800 0d19:58:47  09.7  098 (%) 82.21  OK
inhset=.............
inhset=..........................02849 0d20:07:20  09.7  099 (%) 83.65  OK
rx1 ID: 1->340, rx2 ID: 3->240
Real time used = 2942 sec. for reading in LSB data.
processing rx1 LSB data ....................................................
FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx1.lsb SWARM chunk 1...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000002.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx1.lsb SWARM chunk 2...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000003.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx1.lsb SWARM chunk 3...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000004.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx1.lsb SWARM chunk 4...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000005.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

Done with lsb and rx1 fits-data streaming out!

processing rx2 LSB data ....................................................
FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx2.lsb SWARM chunk 1...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000002.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx2.lsb SWARM chunk 2...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000003.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx2.lsb SWARM chunk 3...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000004.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx2.lsb SWARM chunk 4...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000005.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

Done with lsb and rx2 fits-data streaming out!

Reading USB data -
############################################################################
# Welcome to the Smithonian Astrophysical Observatory using swarm2casa -   #
# A Pipeline: Converting SMA SWARM Data to CASA MeasurementSet:            #
# swarm2read .......................... DRX version 1.4.4-beta: 2019-07-22dbg #
############################################################################

Get pathname, input- and output-filenames, sbidx, optidx ......

Handling USB data -

Warning: Applying both online flagging and applying Tsys ...
wideband patch................swarmDrxP version 1.7.0-beta: 2019-07-22

*********************************
*  Observing Date: 2019 Mar 14  *
*********************************

principal investigator...........Todd Hunter

Geocentrical coordinates (meter):
SMA-ANTID x y z = 1   -128.0506    -73.5050    295.3010
SMA-ANTID x y z = 2    -37.6376   -349.6837     31.6850
SMA-ANTID x y z = 3      0.0000      0.0000      0.0000
SMA-ANTID x y z = 4    -91.0272   -479.0394    145.7238
SMA-ANTID x y z = 5     26.5153   -133.5957   -104.1766
SMA-ANTID x y z = 6   -131.3406   -251.5855    309.4102
SMA-ANTID x y z = 7    -42.6009    -71.5492     86.1979
SMA-ANTID x y z = 8     11.7392    -53.6625    -40.7252
handling header variables........
warning: RX 1 - a number of 10 Tsys measurements may be corrupted.
Read&parse online errors from We-records  of /sma/data/science/mir_data/190314_11:50:03/we_read
number of integrations...........2854
number of c1 + SWARM Spectra.....5
number of polarizations..........1:  XX--non polarization
number of receivers..............2:  rx1->340, rx2->240
number of sidebands..............2:  lsb & usb
number of baselines..............28
number of antennas...............8
number of channels...............65537
computing baseline-based Tsys from eng_read data ...
3c279            id=  1 RA=12:56:11.1651 DEC= -5:47:21.5245
1256-057         id=  2 RA=12:56:11.1651 DEC= -5:47:21.5245
Callisto         id=  3 RA=17:30:06.9077 DEC=-22:37:37.7179
1733-130         id=  4 RA=17:33:02.7026 DEC=-13:04:49.5481
1700-261         id=  5 RA=17:00:53.1532 DEC=-26:10:51.7227
G358.93-0.03     id=  6 RA=17:43:10.0475 DEC=-29:51:46.1302
1744-312         id=  7 RA=17:44:23.5803 DEC=-31:16:35.9862
1924-292         id=  8 RA=19:24:51.0576 DEC=-29:14:30.1241
sgrb2n           id=  9 RA=17:47:19.8766 DEC=-28:22:18.3820
ngc6334l         id= 10 RA=17:20:53.4233 DEC=-35:46:57.8970
A total of 10 source(s) found in this data set.
reading visibilities.............inhid  time(UTC) int(s) percent Gbyt W-status
inhset=..........................00001 0d11:50:41  09.7  000 (%) 0.03  NO
inhset=..........................00100 0d12:05:33  09.7  003 (%) 2.94  OK
inhset=..........................00200 0d12:21:41  09.7  007 (%) 5.87  OK
inhset=..........................00300 0d12:37:49  09.7  010 (%) 8.81  OK
inhset=..........................00400 0d12:54:55  09.7  014 (%) 11.74  OK
inhset=..........................00500 0d13:11:30  09.7  017 (%) 14.68  OK
inhset=..........................00600 0d13:29:34  09.7  021 (%) 17.62  OK
inhset=..........................00700 0d13:47:38  09.7  024 (%) 20.55  OK
inhset=..........................00800 0d14:05:42  09.7  028 (%) 23.49  OK
inhset=..........................00900 0d14:23:07  09.7  031 (%) 26.43  OK
inhset=..........................01000 0d14:41:11  09.7  035 (%) 29.36  OK
inhset=..........................01100 0d14:59:15  09.7  038 (%) 32.30  OK
inhset=..........................01200 0d15:17:00  09.7  042 (%) 35.23  OK
inhset=..........................01300 0d15:35:04  09.7  045 (%) 38.17  OK
inhset=..........................01400 0d15:52:49  09.7  049 (%) 41.11  OK
inhset=..........................01500 0d16:10:53  09.7  052 (%) 44.04  OK
inhset=..........................01600 0d16:27:36  09.7  056 (%) 46.98  OK
inhset=..........................01700 0d16:45:21  09.7  059 (%) 49.91  OK
inhset=..........................01800 0d17:03:25  09.7  063 (%) 52.85  OK
inhset=..........................01900 0d17:21:18  05.2  066 (%) 55.79  NO
inhset=..........................02000 0d17:37:24  09.7  070 (%) 58.72  OK
inhset=..........................02100 0d17:54:49  09.7  073 (%) 61.66  OK
inhset=..........................02200 0d18:12:53  09.7  077 (%) 64.60  OK
inhset=..........................02300 0d18:29:32  09.7  080 (%) 67.53  OK
inhset=..........................02400 0d18:47:36  09.7  084 (%) 70.47  OK
inhset=..........................02500 0d19:05:40  09.7  087 (%) 73.40  OK
inhset=..........................02600 0d19:24:52  09.7  091 (%) 76.34  OK
inhset=..........................02700 0d19:40:43  09.7  094 (%) 79.28  OK
inhset=..........................02800 0d19:58:47  09.7  098 (%) 82.21  OK
inhset=.............
inhset=..........................02849 0d20:07:20  09.7  099 (%) 83.65  OK
rx1 ID: 1->340, rx2 ID: 3->240
Real time used = 3001 sec. for reading in USB data.
processing rx1 USB data ....................................................
FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx1.usb SWARM chunk 1...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000002.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx1.usb SWARM chunk 2...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000003.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx1.usb SWARM chunk 3...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000004.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx1.usb SWARM chunk 4...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000005.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

Done with usb and rx1 fits-data streaming out!
processing rx2 USB data ....................................................
FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx2.usb SWARM chunk 1...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000002.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx2.usb SWARM chunk 2...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000003.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx2.usb SWARM chunk 3...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000004.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

FOR_UVFITSOUT: Ver 3.2.1 2018-10-30
streaming out data rx2.usb SWARM chunk 4...................................
FOR_SWARMUVDT: Ver 1.0.2 2018-11-02
Select parameters: 1.00000000.00000007.00000003.00000005.0000000 ...........
   Processing data stream of 16384 channels .............................
   Polarization-data stream: XX .........................................
   75180 visibilities copied to 75180 output records .......................
   Writing header tables ...................................................

Done with usb and rx2 fits-data streaming out!


=========================================
The start-up time of CASA may vary
depending on whether the shared libraries
are cached or not.
=========================================

IPython 5.1.0 -- An enhanced Interactive Python.

CASA 5.3.0-143   -- Common Astronomy Software Applications

--> CrashReporter initialized.
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
....10....20....30....40....50....60....70....80....90....100%
hit return-key to listobs&plotms check the 1st rx data: SMA181002_rx1.ms
hit return-key to listobs&plotms check the 2nd rx data: SMA181002_rx2.ms
Done! Hit return-key to quit the script

CASApython-report.log

Two CASA measurementSet data outputs are produced: 
SMA181002_rx1.ms & SMA181002_rx2.ms
Done, congratulation! exit from the script!
Fri Aug  2 12:34:48 EDT 2019